study-docker-repro-longevity/artifacts/nickel/template.ncl

{
  artifact_url = "https://example.com/artifact.zip",
  type = "zip",
  doi = "...",
  comment = "Template for artifact configuration.",
  image_name = "image:version",
  dockerfile_location = "path/to/docker/folder",
  package_managers = [ "dpkg" ],
  git_packages = [
    { name = "pkg1", location = "path/to/git/repo"}
  ],
  misc_packages = [
    { name = "mpkg1", url = "http://example.com/package.zip" }
  ]
}
Add POC for using nickel as a configuration lang The `check.ncl` file contains the commands what we could use directly from snakemake to validate the configs and generate the json/yaml for ecg 2024-07-11 16:05:08 +02:00			`{`
Fixed Nickel config files. Added artifact hash log on Snakefile + modified some variables names. Switched from 'tgz' to 'tar' for archive type. 2024-07-16 16:47:17 +02:00			`artifact_url = "https://example.com/artifact.zip",`
Added a comment section for artifacts configuration. Moved hints to the Nickel contract. 2024-07-19 17:05:46 +02:00			`type = "zip",`
Add POC for using nickel as a configuration lang The `check.ncl` file contains the commands what we could use directly from snakemake to validate the configs and generate the json/yaml for ecg 2024-07-11 16:05:08 +02:00			`doi = "...",`
Added a comment section for artifacts configuration. Moved hints to the Nickel contract. 2024-07-19 17:05:46 +02:00			`comment = "Template for artifact configuration.",`
Add POC for using nickel as a configuration lang The `check.ncl` file contains the commands what we could use directly from snakemake to validate the configs and generate the json/yaml for ecg 2024-07-11 16:05:08 +02:00			`image_name = "image:version",`
Fixed Nickel config files. Added artifact hash log on Snakefile + modified some variables names. Switched from 'tgz' to 'tar' for archive type. 2024-07-16 16:47:17 +02:00			`dockerfile_location = "path/to/docker/folder",`
Added a comment section for artifacts configuration. Moved hints to the Nickel contract. 2024-07-19 17:05:46 +02:00			`package_managers = [ "dpkg" ],`
Add POC for using nickel as a configuration lang The `check.ncl` file contains the commands what we could use directly from snakemake to validate the configs and generate the json/yaml for ecg 2024-07-11 16:05:08 +02:00			`git_packages = [`
			`{ name = "pkg1", location = "path/to/git/repo"}`
			`],`
			`misc_packages = [`
Removed the "type" attribute in the misc_package description. 2024-07-19 15:28:58 +02:00			`{ name = "mpkg1", url = "http://example.com/package.zip" }`
Added Nickel constraint on values. 2024-07-17 14:56:38 +02:00			`]`
move artifacts_nickel and artifacts_json to artifacts/nickel and artifacts/json 2024-07-19 16:38:18 +02:00			`}`