GuilloteauQ/study-docker-repro-longevity
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Now running the output formatting commands locally, and not on the container.

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antux18 2024-07-10 15:44:01 +02:00
parent a18bed49b1
commit 03c6602db3
1 changed files with 16 additions and 8 deletions
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24
ecg.py
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@ -27,13 +27,20 @@ HEREPATH = pathlib.Path(__file__).parent.absolute()
PKGLISTS = "./pkglists/" PKGLISTS = "./pkglists/"
# Commands to list installed packages along with their versions and the name # Commands to list installed packages along with their versions and the name
# of the package manager, depending on the package managers: # of the package manager, depending on the package managers.
# Each package manager is associated with a tuple, the first item being
# the query command, and the second being the command that will format
# the output of the query command (this one can be an empty string in case
# the formatting part is already done using the options of the first command).
# The first needs to be run on the container, and the second on the host,
# to take into account container images that do not have the formatting
# packages installed.
pkgmgr_cmd = { pkgmgr_cmd = {
"dpkg":"dpkg -l | awk 'NR>5 {print $2 \",\" $3 \",\" \"dpkg\"}'", \ "dpkg": ("dpkg -l", "awk 'NR>5 {print $2 \",\" $3 \",\" \"dpkg\"}'"), \
"rpm":"rpm -qa --queryformat '%{NAME},%{VERSION},rpm\\n'", \ "rpm":("rpm -qa --queryformat '%{NAME},%{VERSION},rpm\\n'", ""), \
"pacman":"pacman -Q | awk '{print $0 \",\" $1 \",pacman\"}'", \ "pacman":("pacman -Q", "awk '{print $0 \",\" $1 \",pacman\"}'"), \
"pip":"pip freeze | sed 's/==/,/g' | awk '{print $0 \",pip\"}'", \ "pip":("pip freeze", "sed 's/==/,/g' | awk '{print $0 \",pip\"}'"), \
"conda":"/root/.conda/bin/conda list -e | sed 's/=/ /g' | awk 'NR>3 {print $1 \",\" $2 \",conda\"}'" "conda":("/root/.conda/bin/conda list -e", "sed 's/=/ /g' | awk 'NR>3 {print $1 \",\" $2 \",conda\"}'")
} }
# Command to obtain the latest commit hash in a git repository: # Command to obtain the latest commit hash in a git repository:
@ -122,8 +129,9 @@ def check_env(config, src_dir):
path = os.path.join(src_dir, config["location"]) path = os.path.join(src_dir, config["location"])
for pkgmgr in config["package_managers"]: for pkgmgr in config["package_managers"]:
logging.info(f"Checking '{pkgmgr}'") logging.info(f"Checking '{pkgmgr}'")
check_process = subprocess.run("docker run --rm " + config["name"] + " " + pkgmgr_cmd[pkgmgr], cwd=path, capture_output=True, shell=True) check_process = subprocess.run(["docker", "run", "--rm", config["name"]] + pkgmgr_cmd[pkgmgr][0].split(" "), cwd=path, capture_output=True)
pkglist = check_process.stdout.decode("utf-8") format_process = subprocess.run("cat << EOF | " + pkgmgr_cmd[pkgmgr][1] + "\n" + check_process.stdout.decode("utf-8") + "EOF", cwd=path, capture_output=True, shell=True)
pkglist = format_process.stdout.decode("utf-8")
pkglist_file.write(pkglist) pkglist_file.write(pkglist)
if "git_packages" in config.keys(): if "git_packages" in config.keys():
pkglist = "" pkglist = ""