Switching from pip freeze to pip list because of inconsistent output mentionned in #18, close #22. Adding albab_k9db config.

README.md

@@ -13,9 +13,12 @@ It will then download the artifact, build the Dockerfile, and then create a list
 ## Setup
 
 A Linux operating system and the following packages are required:
+- `python`
+- `docker`
 - `snakemake`
 - `gawk`
 - `nickel`
+- `sed`
 
 The following Python package is also required:
 - `requests`

artifacts/nickel/albab_k9db.ncl

@@ -0,0 +1,15 @@
+{
+  artifact_url = "https://github.com/brownsys/K9db/archive/refs/tags/osdi2023.zip",
+  type = "zip",
+  doi = "...",
+  comment = "",
+  image_name = "k9db/latest",
+  dockerfile_location = "K9db-osdi2023",
+  package_managers = [ "dpkg", "pip" ],
+  git_packages = [],
+  misc_packages = [
+    { name = "bazel-4.0.0-installer-linux-x86_64", url = "https://github.com/bazelbuild/bazel/releases/download/4.0.0/bazel-4.0.0-installer-linux-x86_64.sh" },
+    { name = "rust", url = "https://sh.rustup.rs" },
+    { name = "mariadb-connector-cpp-1.0.0-ubuntu-groovy-amd64", url = "https://dlm.mariadb.com/1601342/Connectors/cpp/connector-cpp-1.0.0/mariadb-connector-cpp-1.0.0-ubuntu-groovy-amd64.tar.gz" }
+  ]
+}

artifacts/nickel/template.ncl

@@ -5,7 +5,7 @@
   comment = "Template for artifact configuration.",
   image_name = "image:version",
   dockerfile_location = "path/to/docker/folder",
-  package_managers = [ "dpkg" ],
+  package_managers = [ "dpkg", "rpm", "pacman", "pip", "conda" ],
   git_packages = [
     { name = "pkg1", location = "path/to/git/repo" }
   ],

ecg.py

@@ -231,7 +231,7 @@ def check_env(config, src_dir, pkglist_path):
         "dpkg": ("dpkg", "-l", "awk 'NR>5 {print $2 \",\" $3 \",\" \"dpkg\"}'"), \
         "rpm":("rpm", "-qa --queryformat '%{NAME},%{VERSION},rpm\\n'", ""), \
         "pacman":("pacman", "-Q", "awk '{print $0 \",\" $1 \",pacman\"}'"), \
-        "pip":("pip", "freeze", "sed 's/==/,/g' | awk '{print $0 \",pip\"}'"), \
+        "pip":("pip", "list", "awk 'NR>2 {print $1 \",\" $2 \",\" \"pip\"}'"), \
         "conda":("/root/.conda/bin/conda", "list -e", "sed 's/=/ /g' | awk 'NR>3 {print $1 \",\" $2 \",conda\"}'")
     }
     # Command to obtain the latest commit hash in a git repository (separated