Commit Graph

15 Commits

Author SHA1 Message Date
4329e333ea Added shi_welder, renamed OAR timeout error. 2024-07-24 10:13:53 +02:00
687b777912 Merge remote-tracking branch 'origin/workflow_config' 2024-07-23 17:26:03 +02:00
Quentin Guilloteau
944b1bf6f9 checkpoint in case of reaching walltime 2024-07-21 17:32:04 +02:00
Quentin Guilloteau
566eb778f2 fix execution on grid5000 from namespace 2024-07-21 16:13:52 +02:00
Quentin Guilloteau
318955865c typo 2024-07-21 16:12:40 +02:00
Quentin Guilloteau
8ed548c435 first try for g5k execution 2024-07-20 15:41:56 +02:00
cc605943a9 Added a comment section for artifacts configuration. Moved hints to the Nickel contract. 2024-07-19 17:05:46 +02:00
Quentin Guilloteau
9769f6b533 Add config for snakemake 2024-07-19 16:33:27 +02:00
a7bf9cee94 Written a doc for the output. Removed the "type" attribute from the Nickel contract, closing #17. 2024-07-19 16:18:49 +02:00
d791064183 Added Nickel constraint on values. 2024-07-17 14:56:38 +02:00
1aaa77cba3 Fixed Nickel contract and check files. Fixed input/output files in Snakefile. 2024-07-16 17:35:09 +02:00
69e447ab0a Fixed Nickel config files. Added artifact hash log on Snakefile + modified some variables names. Switched from 'tgz' to 'tar' for archive type. 2024-07-16 16:47:17 +02:00
Quentin Guilloteau
4432a93123 integrate nickel in workflow 2024-07-16 13:59:44 +02:00
Quentin Guilloteau
28126f8b3e basic workflow for ecg 2024-07-11 15:17:16 +02:00
Quentin Guilloteau
3737dd29e6 add start of workflow to extract non blacklisted artifacts 2024-07-11 13:37:07 +02:00