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GuilloteauQ
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study-docker-repro-longevity
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97447e59a1
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antux18
97447e59a1
The results of the get_analysis_dates function being used as inputs in some Snakemake rules, this causes Snakemake to overwrite older analysis, probably because the files used to generate these older analysis have been modified. To avoid overwriting older analysis, we only specify today's analysis in the input, and use a bash wrapper script to both fetch the older analysis by itself (by giving it the folder where to look), and run the analysis with the fetched files. So I removed get_analysis_dates and replaced it with the wrapper script every time it was used.
...
I also removed the older unfinished analysis wrapper that I forgot it existed...
2024-08-23 16:14:46 +02:00
..
aggregate_wrapper.sh
The results of the get_analysis_dates function being used as inputs in some Snakemake rules, this causes Snakemake to overwrite older analysis, probably because the files used to generate these older analysis have been modified. To avoid overwriting older analysis, we only specify today's analysis in the input, and use a bash wrapper script to both fetch the older analysis by itself (by giving it the folder where to look), and run the analysis with the fetched files. So I removed get_analysis_dates and replaced it with the wrapper script every time it was used.
2024-08-23 16:14:46 +02:00
analysis_wrapper.sh
The results of the get_analysis_dates function being used as inputs in some Snakemake rules, this causes Snakemake to overwrite older analysis, probably because the files used to generate these older analysis have been modified. To avoid overwriting older analysis, we only specify today's analysis in the input, and use a bash wrapper script to both fetch the older analysis by itself (by giving it the folder where to look), and run the analysis with the fetched files. So I removed get_analysis_dates and replaced it with the wrapper script every time it was used.
2024-08-23 16:14:46 +02:00
ecg_oar_wrapper.oar.bash
Adding missing changes from the previous commit because I wasn't in the root folder...
2024-08-15 12:23:34 +02:00
ecg_wrapper.sh
Adding missing changes from the previous commit because I wasn't in the root folder...
2024-08-15 12:23:34 +02:00
submission_g5k.py
checkpoint in case of reaching walltime
2024-07-21 17:32:04 +02:00
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Accueil Chapril
Services libres
Nous suivre
CGU
Mentions légales
Nous contacter