Added .gitignore

1 year ago · f808c7854b
10 changed files with 6735 additions and 3 deletions
--- a/.gitignore
+++ b/.gitignore
@ -1,2 +1,3 @@
 .vscode/
-tb-venv/
+tb-venv/
+src/.ipynb_checkpoints
--- a/data/analyses/guesses.csv
+++ b/data/analyses/guesses.csv
--- a/img/n_appearences_species.png
+++ b/img/n_appearences_species.png
--- a/models/saved_model.pbtxt/labels.pickle
+++ b/models/saved_model.pbtxt/labels.pickle
--- a/models/saved_model.pbtxt/saved_model.pb
+++ b/models/saved_model.pbtxt/saved_model.pb
--- a/models/saved_model.pbtxt/variables/variables.data-00000-of-00001
+++ b/models/saved_model.pbtxt/variables/variables.data-00000-of-00001
--- a/models/saved_model.pbtxt/variables/variables.index
+++ b/models/saved_model.pbtxt/variables/variables.index
--- a/src/Bird_ID_404_species_CNN_TL_clean.ipynb
+++ b/src/Bird_ID_404_species_CNN_TL_clean.ipynb
@ -38,13 +38,38 @@
  },
  {
   "cell_type": "code",
-   "execution_count": 0,
+   "execution_count": 1,
   "metadata": {
    "colab": {},
    "colab_type": "code",
    "id": "QIR81L-ArDn3"
   },
-   "outputs": [],
+   "outputs": [
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "\u001b[31mERROR: Could not find a version that satisfies the requirement tensorflow-gpu==2.0.0-alpha0\u001b[0m\r\n",
+      "\u001b[31mERROR: No matching distribution found for tensorflow-gpu==2.0.0-alpha0\u001b[0m\r\n"
+     ]
+    },
+    {
+     "ename": "ModuleNotFoundError",
+     "evalue": "No module named 'joblib'",
+     "output_type": "error",
+     "traceback": [
+      "\u001b[0;31m---------------------------------------------------------------------------\u001b[0m",
+      "\u001b[0;31mModuleNotFoundError\u001b[0m                       Traceback (most recent call last)",
+      "\u001b[0;32m<ipython-input-1-1532f22b3d57>\u001b[0m in \u001b[0;36m<module>\u001b[0;34m\u001b[0m\n\u001b[1;32m      8\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mos\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m      9\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mtensorflow\u001b[0m \u001b[0;32mas\u001b[0m \u001b[0mtf\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 10\u001b[0;31m \u001b[0;32mfrom\u001b[0m \u001b[0msklearn\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mmodel_selection\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mtrain_test_split\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     11\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0mkeras\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mutils\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mto_categorical\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     12\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0mkeras\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mcallbacks\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mModelCheckpoint\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mReduceLROnPlateau\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mEarlyStopping\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
+      "\u001b[0;32m~/Documents/projects/TensorBird/tb-venv/lib/python3.8/site-packages/scikit_learn-0.24.1-py3.8-linux-x86_64.egg/sklearn/__init__.py\u001b[0m in \u001b[0;36m<module>\u001b[0;34m\u001b[0m\n\u001b[1;32m     80\u001b[0m     \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0m_distributor_init\u001b[0m  \u001b[0;31m# noqa: F401\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     81\u001b[0m     \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0m__check_build\u001b[0m  \u001b[0;31m# noqa: F401\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 82\u001b[0;31m     \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0mbase\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mclone\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     83\u001b[0m     \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0mutils\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0m_show_versions\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mshow_versions\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     84\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n",
+      "\u001b[0;32m~/Documents/projects/TensorBird/tb-venv/lib/python3.8/site-packages/scikit_learn-0.24.1-py3.8-linux-x86_64.egg/sklearn/base.py\u001b[0m in \u001b[0;36m<module>\u001b[0;34m\u001b[0m\n\u001b[1;32m     15\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0m__version__\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     16\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0m_config\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mget_config\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 17\u001b[0;31m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0mutils\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0m_IS_32BIT\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     18\u001b[0m from .utils._tags import (\n\u001b[1;32m     19\u001b[0m     \u001b[0m_DEFAULT_TAGS\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
+      "\u001b[0;32m~/Documents/projects/TensorBird/tb-venv/lib/python3.8/site-packages/scikit_learn-0.24.1-py3.8-linux-x86_64.egg/sklearn/utils/__init__.py\u001b[0m in \u001b[0;36m<module>\u001b[0;34m\u001b[0m\n\u001b[1;32m     21\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     22\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0mmurmurhash\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mmurmurhash3_32\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 23\u001b[0;31m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0mclass_weight\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mcompute_class_weight\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mcompute_sample_weight\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     24\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0m_joblib\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     25\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mexceptions\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mDataConversionWarning\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
+      "\u001b[0;32m~/Documents/projects/TensorBird/tb-venv/lib/python3.8/site-packages/scikit_learn-0.24.1-py3.8-linux-x86_64.egg/sklearn/utils/class_weight.py\u001b[0m in \u001b[0;36m<module>\u001b[0;34m\u001b[0m\n\u001b[1;32m      5\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mnumpy\u001b[0m \u001b[0;32mas\u001b[0m \u001b[0mnp\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m      6\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m----> 7\u001b[0;31m \u001b[0;32mfrom\u001b[0m \u001b[0;34m.\u001b[0m\u001b[0mvalidation\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0m_deprecate_positional_args\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m      8\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m      9\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n",
+      "\u001b[0;32m~/Documents/projects/TensorBird/tb-venv/lib/python3.8/site-packages/scikit_learn-0.24.1-py3.8-linux-x86_64.egg/sklearn/utils/validation.py\u001b[0m in \u001b[0;36m<module>\u001b[0;34m\u001b[0m\n\u001b[1;32m     20\u001b[0m \u001b[0;31m# mypy error: Module 'numpy.core.numeric' has no attribute 'ComplexWarning'\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     21\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0mnumpy\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mcore\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mnumeric\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0mComplexWarning\u001b[0m  \u001b[0;31m# type: ignore\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 22\u001b[0;31m \u001b[0;32mimport\u001b[0m \u001b[0mjoblib\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     23\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     24\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0mcontextlib\u001b[0m \u001b[0;32mimport\u001b[0m \u001b[0msuppress\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
+      "\u001b[0;31mModuleNotFoundError\u001b[0m: No module named 'joblib'"
+     ]
+    }
+   ],
   "source": [
    "!pip install -q tensorflow-gpu==2.0.0-alpha0\n",
    "import cv2\n",
--- a/src/PlotAffluence.ipynb
+++ b/src/PlotAffluence.ipynb
--- a/src/TensorBird_execute_saved_model.ipynb
+++ b/src/TensorBird_execute_saved_model.ipynb