meta:
  updated: "2023-07-29"
contact:
  name: Samuel ORTION
  email: samuel@ortion.fr
  date_of_birth: "2023-01-21"
  job: Bioinformatics student
  location:
    address: |
      Appartement B020 Estudines le Parc
      61 Boulevard de l'Yerres
    city: Évry-Courcouronnes
    country: FR
    zip: "91000"
  phone: "+33621580348"
experiences:
  - company: Pasteur Institute
    position: Internship in bioinformatics
    date: July-August 2023
    summary: |
      In the Spatial Regulation of Genomes team, development of a piece of software as an attempt to speed up reads location identification for Hi-C data, 
      on repeated regions of the genome using previously detected repeats (RepeatMasker). 
  - company: Lyon Neurosciences Research Center
    position: Internship in computational neurosciences
    date: May-June 2023
    summary: |
      Study of rat electrophysiological (LFP, respiration, whisking) signals using Python scripting.
  - company: Natural-Solutions
    position: Computer Science Internship
    date: Janvier 2022
    summary: |
      A short week of internship in a web development agency.
      Participation in the writing of a documentation and a piece of script for processing the output of a detection and identification model of nocturnal bird calls based on audio spectrograms.
      Discovery of the Scrum method.
    website: https://www.natural-solutions.eu/
    tags:
      - docs
      - oiseaux
      - spectrogrammes
      - scrum
  
profiles:
  - network: Site web
    url: https://samuel.ortion.fr/
  - network: Blog
    url: https://blog.samuel.ortion.fr/
  - network: Pleroma
    url: https://pleroma.s1gm4.eu/samulus
  # - network: Facebook
  #   url: https://facebook.com/samuel.ortion/
  # - network: Twitter
  #   url: https://twitter.com/SAmULuUus/
education:
  - degree: Master Genomics, Informatics and Mathematics for Health and Environment
    date: 2023-2025
    institution: Paris-Saclay University
    website: https://www.universite-paris-saclay.fr/formation/master/bio-informatique
  - degree: Double bachelor in biology and computer science
    date: 2020-2023
    institution: Paris-Saclay University
    website: https://www.universite-paris-saclay.fr/formation/licence-double-diplome/informatique-sciences-de-la-vie
    summary: |
      Participation in the 2023 edition of the Digitals for Genomics hackathon (team DeepContact, Institut Pasteur).
      Participation in the 2021 and 2022 editions of "Nuit de l'Info".
      Participation in the 2023 edition of the iGEM competition (iGEM Évry-Paris-Saclay team).
  - degree: Scientific baccalaureate with a speciality in life and earth sciences and a European mention in English
    date: 2017-2020
    institution: Lycée Notre-Dame, Le Mans (France, 72)
    summary: |
      Obtaining the baccalaureate with honours.
      Participation in the chemistry olympiads (qualified first in the departmental tests in Sarthe in 2020).
      In 2020, my class participated in the "Passeport Recherche" project; we worked with CRCINA Researchers from Angers (49) on cancer.
skills:
  - name: C
  - name: C++
  - name: Rust
  - name: Python
  - name: R
  - name: Julia
  - name: JavaScript
  - name: Java
  - name: PHP
  - name: SHELL
  - name: Docker
  - name: QEMU/KVM
  - name: LaTeX/LuaLaTeX
  - name: HTML
  - name: CSS
languages:
  - name: Français
    level: Native
  - name: Anglais
    level: B2
  - name: German
    level: A2
projects:
  - name: OpenGeoGame
    description: |
      A free clone of JeuxGeographiques
      Place a city in France on a satellite map
    url: https://geo.games.1ib.re/
hobbies:
  - name: Ornithologie
    details: |
      Get out in the field to monitor birds and participate in citizen science programs.
  - name: Wildlife photographs
    url: https://gallery.samuel.ortion.fr/
  - name: Free software / Linux User Group Linux Essonnes