0a8b0c85c6
Fixed analysis part in Snakemake again, needs testing. Moved test and template artifacts back to parent folder. Changes analysis output dir.
2024-08-19 19:02:23 +02:00
0bbed9d0f5
Adding missing changes from the previous commit because I wasn't in the root folder...
2024-08-15 12:23:34 +02:00
Quentin Guilloteau
a24091b390
start writing protocol
2024-08-01 17:49:41 +02:00
Quentin Guilloteau
d7749369b4
move artifacts_nickel and artifacts_json to artifacts/nickel and artifacts/json
2024-07-19 16:38:18 +02:00
cb98727554
Added artifacts_json to git ignore and deleting, closing #15 . Deleted old YAML files. Added hints on the config template.
2024-07-19 15:23:00 +02:00
1aaa77cba3
Fixed Nickel contract and check files. Fixed input/output files in Snakefile.
2024-07-16 17:35:09 +02:00
2ad37f46f2
Initial support for Docker errors parsing.
2024-07-12 17:50:19 +02:00
23c4f7ede4
Added support for cache. Added run and clean scripts.
2024-07-12 12:10:03 +02:00
2f779d0ab0
- Config files now contain 1 Dockerfile only.
...
- Removed support for running ECG with multiple config files at the same time: will be called with a single one only
- Removed storage management of outputs, paths are now given using command line args.
- Started working on cache support.
2024-07-11 17:14:58 +02:00
30a82efc70
Adding support for multiple config files. Improving structure of output files.
2024-07-10 19:01:46 +02:00
561748ed59
Initial code.
2024-07-09 18:25:21 +02:00
