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2 Commits
bb41621afd
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f8d6844197
Author | SHA1 | Date |
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Samuel Ortion | f8d6844197 | |
Samuel Ortion | 0d203fe704 |
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@ -1,24 +0,0 @@
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# Minted
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&set_tex_cmds( '-shell-escape %O '
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. '\'\PassOptionsToPackage{outputdir={%Y}}{minted}\input{%S}\''
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);
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$pdflatex = 'lualatex -shell-escape -file-line-error -interaction=nonstopmode -synctex=1 -output-directory=build %O %S | texlogsieve';
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$aux_dir = 'build';
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$bibtex_use = 2;
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# Amend cleaned extensions
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$clean_ext .= " fdb_latexmk run.xml synctex.gz";
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# Make latexmk quiet
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$latexmk_silent = 1;
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# Makeglossaries
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add_cus_dep('acn', 'acr', 0, 'makeglossaries');
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add_cus_dep('glo', 'gls', 0, 'makeglossaries');
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$clean_ext .= " acr acn alg glo gls glg";
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sub makeglossaries {
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my ($base_name, $path) = fileparse( $_[0] );
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my @args = ( "-q", "-d", $path, $base_name );
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if ($silent) { unshift @args, "-q"; }
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return system "makeglossaries", "-d", $path, $base_name;
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}
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BIN
tex/cv-en.pdf
BIN
tex/cv-en.pdf
Binary file not shown.
170
tex/cv-en.tex
170
tex/cv-en.tex
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@ -1,26 +1,25 @@
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%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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% MyOwnCV - English version
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%
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% Author Samuel ORTION
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% Author Samuel Ortion
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%
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% 🄯 2022-2023
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% Some right reserved
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%
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% Version v0.0.6 (2023-07-29)
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% Version v0.0.6 (2023-09-08)
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%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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\documentclass[11pt]{mycv}
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\documentclass[15pt]{mycv}
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\usepackage[french]{babel}
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\usepackage{datenumber}
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\usepackage{fp}
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\usepackage{luatextra}
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\usepackage{csquotes}
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\usepackage{luatextra}
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\hypersetup{
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pdfauthor={Samuel ORTION},
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pdftitle={Samuel ORTION's CV},
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pdfauthor={Samuel Ortion},
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pdftitle={CV - Samuel Ortion},
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pdfsubject={CV},
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pdfkeywords={Computer Science, Biology}
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}
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@ -42,19 +41,18 @@
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% TOP BAR
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%----------------------------------------------------------------------------------------
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\begin{TopBar}{\ColorTextSide}
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\Name{\ColorHighlight}{Samuel \textsc{Ortion}}{Bioinformatics student}{\myage\ years old}
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\Name{\ColorHighlight}{\textbf{Samuel Ortion}}{Bioinformatics student}{\myage\ years old}
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%%% Contact
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\TextSeparator{\ColorHighlight}{Contact}
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\begin{DoubleColumns}
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\begin{ItemList}{\ColorHighlight}
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\item [\faAt]\href{mailto:samuel@ortion.fr}{samuel@ortion.fr}
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\item [\Large\faMobile]\:06 21 58 03 48
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\item [\faMobile]+33 6 21 58 03 48
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\end{ItemList}
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\nextcolumn
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\begin{ItemList}{\ColorHighlight}
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\item [\Large\faMapMarker]
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Appt. B020 Estudines le Parc \\
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\item [\faMapMarker] Appt. B020 Estudines le Parc \\
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61 Bd. de L'Yerres \\
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91000 Évry - Courcouronnes
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\end{ItemList}
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@ -88,34 +86,35 @@
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%%% Goal
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\begin{center}
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\Large
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\textbf{\textit{Internship at Pasteur Institute}} \\
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\textbf{\textit{Looking for a Computational Biology Internship}} \\
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\end{center}
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\TextSeparatorBis{\ColorHighlight} {\faLink}{Links}
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\begin{ItemList}{\ColorHighlight}
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\item [\Large\faGlobe] \:\href{https://samuel.ortion.fr/}{samuel.ortion.fr}
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\item [\Large\faGit] \href{https://framagit.org/sortion}{sortion} (\href{https://forge.chapril.org/sortion/}{\includegraphics[height=7pt]{../img/icons/Logo_Gitea.png}}, \href{https://framagit.org/sortion}{\faGitlab}, \href{https://github.com/UncleSamulus}{\faGithub})
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\item [\Large\faGlobe] \href{https://samuel.ortion.fr/}{samuel.ortion.fr}
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\item [\Large\faGitlab] \href{https://framagit.org/sortion/}{framagit.org/sortion}
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\item [${\includegraphics[height=15pt]{../img/icons/rosalind_logo_green.png}}$] \href{https://rosalind.info/users/Samulus.i.n/}{Samulus.i.n on Rosalind.info}
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\end{ItemList}
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\vspace{1cm}
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%%% Hard skills
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\TextSeparatorBis{\ColorHighlight}{\faGears}{Skills}
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\TextSeparatorBis{\ColorHighlight}{\faHammer}{Skills}
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\begin{ItemList}{\ColorHighlight}
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\item [\faCode] C/C++, Rust, Python, R, JS, Java, SHELL, PHP, OCaml\ldots
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\item [\faFileCodeO] HTML, CSS, \LuaLaTeX
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\item [\faCode] C/C++, Rust, Python, R, shell \\
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JS, Java, PHP, OCaml\ldots
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\item [\faFileCode] HTML, CSS, \LuaLaTeX
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\item [\faDatabase] SQL
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\item [\faLinux] GNU/Linux, Docker
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\item [\faGit] Git
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\item [{$\includegraphics[height=10pt]{../img/icons/UML-green.png}$}] UML2
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% \item [\faCubes]
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\item [\faFlask]
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\begin{itemize}
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\item [{$\includegraphics[height=12pt]{../img/icons/dna-green.png}$}] PCR, RT-PCR, Clone
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\item [{$\includegraphics[height=10pt]{../img/icons/spectro-green.png}$}] Spectrophotometry
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\item [{$\includegraphics[height=10pt]{../img/icons/bacille-green.png}$}] Microrganism culture
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\item [{$\includegraphics[height=10pt]{../img/icons/microscope-green.png}$}] Microscopy
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\item [{$\includegraphics[height=10pt]{../img/icons/electrophorese-green}$}] Electrophoresis
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\end{itemize}
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\item [\faLinux] GNU/Linux, Docker, Slurm
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\item [\faGit*] Git
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\item [{$\includegraphics[height=15pt]{../img/icons/UML-green.png}$}] UML2
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\item [\faFlask] Basic Laboratory Technics
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\begin{ItemList}{\ColorHighlight}
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\item [\faDna] PCR, RT-PCR, Cloning
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\item [{$\includegraphics[height=15pt]{../img/icons/spectro-green.png}$}] Spectrophotometry
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\item [{$\includegraphics[height=15pt]{../img/icons/bacille-green.png}$}] Microrganism culture
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\item [{$\includegraphics[height=15pt]{../img/icons/microscope-green.png}$}] Microscopy
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\item [{$\includegraphics[height=15pt]{../img/icons/electrophorese-green}$}] Electrophoresis
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\end{ItemList}
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\end{ItemList}
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\vspace{1cm}
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@ -131,7 +130,7 @@
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%----------------------------------------------------------------------------------------
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% Picture
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%----------------------------------------------------------------------------------------
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\DefineProfile{\ColorOther}{\ColorTextSide}{../img/portrait.jpg}
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\DefineProfile{\ColorOther}{\ColorTextSide}{../img/portrait_sortion_pj-crop.jpeg}
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%----------------------------------------------------------------------------------------
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% Main
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@ -141,57 +140,55 @@
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%%% Education
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\MainTitleBis{\ColorHighlight}{\ColorTextMain}{Education}{\faGraduationCap}
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% \Experience
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% {\ColorHighlight}
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% {Master of Bioinformatics}
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% {Université d'Évry val d'Essonne -- Paris-Saclay}
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% {2023}
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% {
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% Write here your description.\\
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%
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%
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% }
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\Experience
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{\ColorHighlight}
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{Master Genomics, Informatics and Mathematics for Health and Environment}
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{Université d'Évry val d'Essonne -- Université Paris-Saclay}
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{2023-present}
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{
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}
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\Experience
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{\ColorHighlight}
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{\href{https://www.universite-paris-saclay.fr/formation/licence-double-diplome/informatique-sciences-de-la-vie/}{Double bachelor degree in Biology and Computer Science}}
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{Évry -- Paris-Saclay University, France}
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{2020-\faUndo}
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{
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\begin{itemize}
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\item Introduction to computational biology through little projects along the cursus;
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\item Participation to the Digital for Genomics Hackathon 2023 edition.
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\end{itemize}
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}
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\Experience
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{\ColorHighlight}
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{High School Diploma in Science (Bac S) - Biology and Earth Sciences major - English European Mention}
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{Lycée Notre-Dame, Le Mans, France}
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{2017-2020}
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{
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\begin{itemize}
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\item Baccalaureate with highest honours, with a DNL SVT European
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mention (biology and earth sciences in English);
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\item \textquote{\href{https://passeportrecherche.univ-nantes.fr/}{Research Passport}}.
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\item \href{https://www.olympiades-chimie.fr/}{Olympiades de la Chimie} (qualified 1\textsuperscript{st} in departmental contest, Sarthe, 2020).
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\end{itemize}
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}
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{\ColorHighlight}
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{\href{https://www.universite-paris-saclay.fr/formation/licence-double-diplome/informatique-sciences-de-la-vie/}
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{Bachelor's Degree in Computer Science and Biology}
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}
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{Université d'Évry val d'Essonne -- Université Paris-Saclay}
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{ \hfill 2020-2023}
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{
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\begin{ItemList}{\ColorHighlight}
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\item [] Participation to the Digital for Genomics Hackathon 2023 at Évry Genopole with the \textit{DeepContact} Team (Institut Pasteur).
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\item [] A bit of bioinformatics with the iGEM 2023 Évry - Paris-Saclay Team.
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\end{ItemList}
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}
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%%% Experiences
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\MainTitleBis{\ColorHighlight}{\ColorTextMain}{Work Experiences}{\faSuitcase}
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\Experience
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{\ColorHighlight}
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{Neurosciences Internship}
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{Centre de Recherche en Neurosciences de Lyon}
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{May-June 2023}
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{Bioinformatics Internship}
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{Institut Pasteur - Spatial Regulation of Genomes}
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{July-August 2023}
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{
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\begin{itemize}
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\item Electrophysiological (LFP, respiration and whisking) signals analysis in rats;
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\item Python scripting for data analysis and visualization.
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\end{itemize}
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\begin{ItemList}{\ColorHighlight}
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\item [] Development of a Python script attempting to shortcut the too heavy
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Hi-C reads mapping (\texttt{bowtie2}) on genomes with numerous repeated sequences, with a rough approximation based on previously annotated repeats positions (\texttt{RepeatMasker}).
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\end{ItemList}
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}
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\Experience
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{\ColorHighlight}
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{Neurosciences Internship}
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{Lyon Neurosciences Research Center}
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{May-July 2023}
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{
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\begin{ItemList}{\ColorHighlight}
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\item [] Electrophysiological signals analysis in rats (LFP and respiration);
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\item [] Signal processing with Python libraries.
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\end{ItemList}
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}
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\Experience
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{\ColorHighlight}
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{\href{https://www.natural-solutions.eu/}{Natural-Solutions}}
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{January 2022}
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{
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\begin{itemize}
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\item One-week internship in the \href{https://www.natural-solutions.eu/}{Natural-Solutions} web development agence, based in Marseille~\faLink.
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\item Contributed to the development of an artificial intelligence involved in automatic nocturnal bird flight call detection and identification for the \href{https://nocturnal-bird-migration.com/}{NBM Challenge~\faLink}.
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\end{itemize}
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\begin{ItemList}{\ColorHighlight}
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\item [] Contribution to a deep learning project aiming at automatic detection and identification of nocturnal bird flight calls: \href{https://nocturnal-bird-migration.com/}{NBM Challenge}.
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\end{ItemList}
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}
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%%% Activities
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\MainTitleBis{\ColorHighlight}{\ColorTextMain}{Activities}{\faUsers}
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\vspace*{0.5cm}
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\begin{ItemList}{\ColorHighlight}
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\item [] Bird watching, sighting data sharing on crowd sourced database;
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\item [] Bat ultrasound recording and analyzis (Vigie-Chiro);
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\item [] \href{https://gallery.samuel.ortion.fr/}{Wildlife Photography~\faLink};
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\item [] Software development \& GNU/Linux system administration;
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\item [] \href{https://liness.org/}{Liness Linux User Group~\faLink};
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\item [] Contributor to \url{https://bioinfo-fr.net} blog~\faLink;
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\item [] Bioinformatics learning through problem solving at \href{https://rosalind.info/users/Samulus.i.n/}{Rosalind.info~{\includegraphics[height=14pt]{../img/icons/rosalind-green.png}}}.
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\end{ItemList}
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\vspace{0.5cm}
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\begin{DoubleColumns}
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\begin{ItemList}{\ColorHighlight}
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\item [] Bird watching;
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\item [] Bat recording (Vigie-Chiro);
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\item [] \href{https://gallery.samuel.ortion.fr/}{Wildlife Photography};
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\end{ItemList}
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\nextcolumn
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\begin{ItemList}{\ColorHighlight}
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\item [] Software development;
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\item [] \href{https://liness.org/}{Liness Linux User Group};
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\item [] Wrote on \href{https://bioinfo-fr.net/author/samuel-ortion}{bioinfo-fr.net} blog.
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\end{ItemList}
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\end{DoubleColumns}
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\end{MainPart}
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\end{document}
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@ -28,7 +28,7 @@
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\usepackage{lipsum}
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\pagestyle{empty} % No headers or footers
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\usepackage{moresize} % Provides more font size commands (\HUGE and \ssmall)
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\usepackage{fontawesome} % fontawesome
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\usepackage{fontawesome}
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\usepackage{ifthen}
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