Commit Graph

14 Commits

Author SHA1 Message Date
ece5749b7a Fixed analysis in Snakefile. Started working on plotting part. 2024-08-19 16:37:51 +02:00
f6f20cb0d6 Integrated the whole analysis part to the Snakefile, but needs testing (#44). 2024-08-19 15:21:28 +02:00
e943be4efe Integrated softenv analysis to workflow. Changed input and output cmd options in analysis scripts to take multiple files at once. Moved test and template artifacts in an excluded folder. 2024-08-19 14:59:08 +02:00
1e5dd77cd8 Working on the integration of the analysis to the snakemake workflow. 2024-08-16 17:41:20 +02:00
0bbed9d0f5 Adding missing changes from the previous commit because I wasn't in the root folder... 2024-08-15 12:23:34 +02:00
e8b25b74a7 Added build status analysis. Now logging build status even if build is successful, to make analysis easier (as mentionned in #26). Added a new error type. 2024-07-26 19:00:25 +02:00
Quentin Guilloteau
944b1bf6f9 checkpoint in case of reaching walltime 2024-07-21 17:32:04 +02:00
Quentin Guilloteau
566eb778f2 fix execution on grid5000 from namespace 2024-07-21 16:13:52 +02:00
Quentin Guilloteau
8ed548c435 first try for g5k execution 2024-07-20 15:41:56 +02:00
Quentin Guilloteau
9769f6b533 Add config for snakemake 2024-07-19 16:33:27 +02:00
1aaa77cba3 Fixed Nickel contract and check files. Fixed input/output files in Snakefile. 2024-07-16 17:35:09 +02:00
69e447ab0a Fixed Nickel config files. Added artifact hash log on Snakefile + modified some variables names. Switched from 'tgz' to 'tar' for archive type. 2024-07-16 16:47:17 +02:00
Quentin Guilloteau
4432a93123 integrate nickel in workflow 2024-07-16 13:59:44 +02:00
Quentin Guilloteau
28126f8b3e basic workflow for ecg 2024-07-11 15:17:16 +02:00